Package: ctrdata 1.19.5.9000

ctrdata: Retrieve and Analyze Clinical Trials in Public Registers

A system for querying, retrieving and analyzing protocol- and results-related information on clinical trials from four public registers, the 'European Union Clinical Trials Register' ('EUCTR', <https://www.clinicaltrialsregister.eu/>), 'ClinicalTrials.gov' (<https://clinicaltrials.gov/> and also translating queries the retired classic interface), the 'ISRCTN' (<http://www.isrctn.com/>) and the 'European Union Clinical Trials Information System' ('CTIS', <https://euclinicaltrials.eu/>). Trial information is downloaded, converted and stored in a database ('PostgreSQL', 'SQLite', 'DuckDB' or 'MongoDB'; via package 'nodbi'). Documents in registers associated with trials can also be downloaded. Other functions identify deduplicated records, easily find and extract variables (fields) of interest even from complex nested data as used by the registers, merge variables and update queries. The package can be used for meta-analysis and trend-analysis of the design and conduct as well as of the results of clinical trials.

Authors:Ralf Herold [aut, cre]

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ctrdata.pdf |ctrdata.html
ctrdata/json (API)
NEWS

# Install 'ctrdata' in R:
install.packages('ctrdata', repos = c('https://rfhb.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/rfhb/ctrdata/issues

On CRAN:

clinical-dataclinical-researchclinical-studiesclinical-trialsctgovdatabaseduckdbmongodbnodbipostgresqlregistersqlitestudiestrial

7.78 score 43 stars 32 scripts 964 downloads 11 exports 51 dependencies

Last updated 11 days agofrom:cbc18bad55. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 10 2024
R-4.5-winOKNov 10 2024
R-4.5-linuxOKNov 10 2024
R-4.4-winOKNov 10 2024
R-4.4-macOKNov 10 2024
R-4.3-winOKNov 10 2024
R-4.3-macOKNov 10 2024

Exports:ctrFindActiveSubstanceSynonymsctrGetQueryUrlctrLoadQueryIntoDbctrOpenSearchPagesInBrowserdbFindFieldsdbFindIdsUniqueTrialsdbGetFieldsIntoDfdbQueryHistorydfMergeVariablesReleveldfName2ValuedfTrials2Long

Dependencies:askpassbitbit64clicliprcountrycodecpp11crayoncurlDBIdigestdplyrfansigenericsgluehmshttrjqrjsonlitelazyevallifecyclelubridatemagrittrmimenodbiopensslpillarpkgconfigprettyunitsprogressR.methodsS3R.ooR.utilsR6Rcppreadrrlangstringisystibbletidyselecttimechangetzdbutf8uuidV8vctrsvroomwithrxml2zip

Install R package ctrdata

Rendered fromctrdata_install.pdf.asisusingR.rsp::asison Nov 10 2024.

Last update: 2020-10-16
Started: 2020-10-16

Retrieve clinical trial information

Rendered fromctrdata_retrieve.pdf.asisusingR.rsp::asison Nov 10 2024.

Last update: 2020-10-16
Started: 2020-10-16

Summarise and analyse clinical trial information

Rendered fromctrdata_summarise.pdf.asisusingR.rsp::asison Nov 10 2024.

Last update: 2021-12-04
Started: 2021-12-04